Batch Protein Prepare

Updated: Oct 09, 2025


Latest versions

1.7.2 for SAMSON 2025 R3

1.7.2 for SAMSON 2025 R3

1.7.2 for SAMSON 2025 R3

2283
126
Free

Batch Protein Prepare

Updated: Oct 09, 2025


Latest versions

1.7.2 for SAMSON 2025 R3

1.7.2 for SAMSON 2025 R3

1.7.2 for SAMSON 2025 R3

2283
126
Prepare proteins in a batch: remove alt. locations, water, ligands, ions, add hydrogens.

This extension automatically downloads and prepares a batch of proteins based on their PDB codes provided in a file or entered in the interface.

You can choose to remove alternate locations, waters, ligands, ions, and add hydrogens.

Batch Protein Prepare is an extension for SAMSON,
the integrative platform for molecular design.

To use Batch Protein Prepare:

1. Create your free account and choose a molecular design plan
2. Download and install SAMSON on your computer
3. Come back to this page to add the extension to your account


When you restart SAMSON, the extension will be automatically installed
and will be usable directly from within SAMSON.