Graphene Image Analyzer

Updated: Oct 09, 2025


Latest versions

2.0.0 for SAMSON 2025 R3

2.0.0 for SAMSON 2025 R3

2.0.0 for SAMSON 2025 R3

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Graphene Image Analyzer

Updated: Oct 09, 2025


Latest versions

2.0.0 for SAMSON 2025 R3

2.0.0 for SAMSON 2025 R3

2.0.0 for SAMSON 2025 R3

Build a graphene model from a TEM image

This extension allows you to build a graphene model from a transmission electron microscopy (TEM) image of graphene.

The reconstructed model can then be used to produce images for publications, to analyze properties, and perform simulations.

Usage

  1. Click 'Open image...' to select an image file. The app automatically attempts to detect atoms positions and guess the size of the surface patch in the image.
  2. Adjust the atom radius to match the one of atoms in the image (in pixels). The app automatically updates the atoms positions and surface size.
  3. Adjust the sensitivity to find more or less atoms.
  4. Click on the image to add / remove atoms.
  5. Click 'Generate surface' to produce a structural model in the document.

Supported image file formats

Supported image file formats are bmp, gif, jpg, jpeg, png, pbm, pgm, ppm, xbm and xpm.

Graphene Image Analyzer is an extension for SAMSON,
the integrative platform for molecular design.

To use Graphene Image Analyzer:

1. Create your free account and choose a molecular design plan
2. Download and install SAMSON on your computer
3. Subscribe to an Expert or Enterprise plan, or just this extension


When you restart SAMSON, the extension will be automatically installed
and will be usable directly from within SAMSON.