Interactive Ramachandran Plot

Publisher: OneAngstrom

Updated: October 29, 2021


Latest versions

Windows: 2.0.0 on SAMSON 2.0.0

Linux: 2.0.0 on SAMSON 2.0.0

Mac: 2.0.0 on SAMSON 2.0.0

234
672

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Free
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Interactive Ramachandran Plot

Publisher: OneAngstrom

Updated: October 29, 2021


Latest versions

Windows: 2.0.0 on SAMSON 2.0.0

Linux: 2.0.0 on SAMSON 2.0.0

Mac: 2.0.0 on SAMSON 2.0.0

234
672
Display Ramachandran diagram of selected residues. Move a residue on the plot and see the effect it has on the protein.

The Ramachandran plot visualizes energetically allowed regions for backbone dihedral angles of amino acids in protein structure.

The plot is updated automatically when a residue moves: move a residue on the plot and see the effect it has on the protein.

Documentation

Tutorial: Interactive Ramachandran Plot.

References

This extension has been originally created by Guillaume Pages as a part of his research work at NANO-D, Inria.

What's new

Some functions have been exposed.

Interactive Ramachandran Plot is an extension for SAMSON,
the integrated platform for molecular design.

To use Interactive Ramachandran Plot:

1. Create your free account and choose a molecular design plan
2. Download and install SAMSON on your computer
3. Come back to this page to add the extension to your account


When you restart SAMSON, the extension will be automatically installed
and will be usable directly from within SAMSON.