RMSD

Khoa Nguyen

Updated: Dec 08, 2015


501
262
1

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RMSD

Khoa Nguyen

Updated: Dec 08, 2015


501
262
1
This app calculates RMSD between 2 structures. If it is an amino acid chains, a sequence alignment of the structures is needed (in fasta format). The fasta format has to be obtained from external sour

This app calculates RMSD between 2 structures. If it is an amino acid chains, a sequence alignment of the structures is needed (in fasta format). The fasta format has to be obtained from external sources. If it is not a protein, the app will try to match atoms one by one in both structures.
RMSD is an extension for SAMSON,
the integrative platform for molecular design.

To use RMSD:

1. Create your free account and choose a molecular design plan
2. Download and install SAMSON on your computer
3. Come back to this page to add the extension to your account


When you restart SAMSON, the extension will be automatically installed
and will be usable directly from within SAMSON.

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