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Rotamers editor

Publisher: OneAngstrom

Updated: July 08, 2020


Latest versions

Windows: 0.12.3 on SAMSON 0.12.0

Linux: 0.12.3 on SAMSON 0.12.0

Mac: 0.12.3 on SAMSON 0.12.0

Free element

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Rotamers editor

Publisher: OneAngstrom

Updated: July 08, 2020


Latest versions:

- Windows: 0.12.3 on SAMSON 0.12.0

- Linux: 0.12.3 on SAMSON 0.12.0

- Mac: 0.12.3 on SAMSON 0.12.0

Modify an amino acid residue into its rotamer or mutate it into an amino acid residue of a different type.

This Element provides the possibility to modify a residue into a different rotamer of the same amino acid type or to mutate it into a residue of a different type.

It also provides a possibility to view all possible rotamers and check clashes.

RotamerEditor

The Rotamer editor uses the Roland Dunbrack’s rotamer library [1].

References

[1] Shapovalov, M.S., and Dunbrack, R.L., Jr. (2011). A smoothed backbone-dependent rotamer library for proteins derived from adaptive kernel density estimates and regressions. Structure, 19, 844-858.