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Protein Path Finder

Publisher: Dmitriy Marin

Updated: August 28, 2019


Latest versions

Windows: 0.8.3 on SAMSON 0.8.5

Linux: 0.8.3 on SAMSON 0.8.5

Mac: 0.8.3 on SAMSON 0.8.5

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Protein Path Finder

Publisher: Dmitriy Marin

Updated: August 28, 2019


Latest versions:

- Windows: 0.8.3 on SAMSON 0.8.5

- Linux: 0.8.3 on SAMSON 0.8.5

- Mac: 0.8.3 on SAMSON 0.8.5

Find protein conformational transition paths within minutes.

Easily define the system and specify the search domain. Find protein conformational transition paths between two conformations in a matter of minutes thanks to the novel ART-RRT method.

Documentation

See the Protein Path Finder tutorial for more information.

References

If you use this app, please cite:

M. K. Nguyen, L. Jaillet and S. Redon. Generating conformational transition paths with low potential-energy barriers for proteins. Journal of Computer-Aided Molecular Design. Journal of Computer-Aided Molecular Design. 2018 Aug;32(8):853-867.